The National Archive of Indonesia published on her website tables of contents of the so-called Daghregisters (Daily accounts) of the Castle Batavia, HR no. 2520. Unfortunately they are in Dutch. In those tables you can find for instance information about the ships arriving at and departing from Batavia (nowadays Djakarta). I extracted the movements of the ships and vessels owned by the E.I.C. The dates mentioned below in the text are the register dates. See also on this weblog the notes dealing with cargo capacities and individual ships.
Andromeda, small yacht, destined towards Siam [Thailand] 4 August 1700
Eenhoorn, ship, arrived at Batavia coming via Ceylon [Sri Lanka] from Persia [Iran] 11 September 1700, destined towards Bantam for a cargo of pepper 22 September 1700
Ellemeet, ship, news of her arrival in Sunda Strait 3 September 1700, arrived at Batavia coming from the Netherlands 8 September 1700
Herderin, small yacht, destined towards Cheribon 29 September 1700
Hobre(e), fluyt, arrived at Batavia coming from the East Coast of Java 9 September 1700, decided to sell her old worn out hull 17 September 1700
Hoen, galliot, departed Batavia towards Cheribon 24 September 1700
Hortsendael, ship, tiding of her arrival at Ceylon [Sri Lanka] from the Netherlands 14 September 1700
Huijs te Bijwegh, fluyt, arrived at Batavia coming from Cape of Good Hope 25 September 1700
Huijs te Duijnen, yacht, arrived at Batavia coming from Bantam 9 September 1700
Huijs te Nieuwburg, fluyt, departed Batavia towards Souratta 25 September 1700
Mansil, British ship, arrived at Batavia coming from England 12 September 1700
Nierop, fluyt, arrived at Batavia coming from Japara with a cargo of woodwork 26 September 1700
Peperboom, fluyt, arrived at Batavia coming from Ceylon [Sri Lanka] 14 September 1700
Pinter, British small ship, tiding of her arrival and departure at and from Samarang 26 September 1700
Princenland, fluyt, departed from Batavia towards Ceylon [Sri Lanka] 13 September 1700
Purmer, yacht, departed Batavia towards Cheribon for a cargo of woodwork 20 September 1700
Schellag, yacht, arrived at Batavia coming from the Netherlands 10 September 2010
Stad Keulen, ship, arrived at Batavia coming via Ceylon [Sri Lanka] from Persia [Iran] 10 September 1700
Susanna, small yacht, arrived at Batavia coming from Malacca with a cargo including cinnamon 21 September 1700
Taxisboom, ship, tiding of her arrival at Ceylon [Sri Lanka] from the Netherlands 14 September 1700
Andromeda, small yacht, destined towards Siam [Thailand] 4 August 1700
Eenhoorn, ship, arrived at Batavia coming via Ceylon [Sri Lanka] from Persia [Iran] 11 September 1700, destined towards Bantam for a cargo of pepper 22 September 1700
Ellemeet, ship, news of her arrival in Sunda Strait 3 September 1700, arrived at Batavia coming from the Netherlands 8 September 1700
Herderin, small yacht, destined towards Cheribon 29 September 1700
Hobre(e), fluyt, arrived at Batavia coming from the East Coast of Java 9 September 1700, decided to sell her old worn out hull 17 September 1700
Hoen, galliot, departed Batavia towards Cheribon 24 September 1700
Hortsendael, ship, tiding of her arrival at Ceylon [Sri Lanka] from the Netherlands 14 September 1700
Huijs te Bijwegh, fluyt, arrived at Batavia coming from Cape of Good Hope 25 September 1700
Huijs te Duijnen, yacht, arrived at Batavia coming from Bantam 9 September 1700
Huijs te Nieuwburg, fluyt, departed Batavia towards Souratta 25 September 1700
Mansil, British ship, arrived at Batavia coming from England 12 September 1700
Nierop, fluyt, arrived at Batavia coming from Japara with a cargo of woodwork 26 September 1700
Peperboom, fluyt, arrived at Batavia coming from Ceylon [Sri Lanka] 14 September 1700
Pinter, British small ship, tiding of her arrival and departure at and from Samarang 26 September 1700
Princenland, fluyt, departed from Batavia towards Ceylon [Sri Lanka] 13 September 1700
Purmer, yacht, departed Batavia towards Cheribon for a cargo of woodwork 20 September 1700
Schellag, yacht, arrived at Batavia coming from the Netherlands 10 September 2010
Stad Keulen, ship, arrived at Batavia coming via Ceylon [Sri Lanka] from Persia [Iran] 10 September 1700
Susanna, small yacht, arrived at Batavia coming from Malacca with a cargo including cinnamon 21 September 1700
Taxisboom, ship, tiding of her arrival at Ceylon [Sri Lanka] from the Netherlands 14 September 1700