The National Archive of Indonesia published on her website tables of contents of the so-called Daghregisters (Daily accounts) of the Castle Batavia; HR no.'s 2510-2511. Unfortunately they are in Dutch. In those tables you can find for instance information about the ships arriving at and departing from Batavia (nowadays Djakarta). I extracted the movements of the ships and vessels owned by the E.I.C. The dates mentioned below in the text are the register dates. See also on this weblog the notes dealing with cargo capacities and individual ships.
Andromeda, small yacht, departed Batavia towards bantam 12 March 1693
Belois, fluyt, departed Batavia towards Palembang with a cargo valued ƒ 108235:19:08
Bije, arrived at Ceylon coming from the Netherlands 12 March 1693
Borsenburgh, fluyt, arrived at Ceylon according to news received 10 March 1693
Boswijk, destined towards Bengal 17 March 1693
Cauw, arrived at Ceylon coming from the Netherlands 12 March 1693
Courtgene, ship, departed Batavia towards Ambon 1 March 1693
Dieren, ship, arrived in the Strait according to a letter received 29 March 1693
Duijff, small fluyt, departed Batavia towards Timor 12 March 1693
Eemland, yacht, departed Batavia towards Banda 1 march 1693
Egelenburgh, fluyt, arrived at Batavia coming from Palembang with a cargo of 1805 picols pepper 10 March 1693
Gidion, fluyt, departed Batavia towards Japara for a cargo of timber 27 March 1693
Grijpvogel, small yacht, departed Batavia towards Ternate 4 March 1693
Grote Visserije, ship, arrived at Ceylon according to news received 10 March 1693
Herderin, small yacht, arrived at Malacca coming from Bengal according to a letter received 9 March 1693
Hobre, fluyt, mentioned as coming from Ceylon 10 March 1693, arrived at Batavia coming from Ceylon 12 March 1693
Hoff van Ilpendam, ship, arrived at Ceylon coming from the Netherlands and destined to be a homeward bound ship 12 March 1693
Huijs te Loo, ship, chamber Amsterdam, arrived in the Strait coming from the Netherlands according to a received letter 22 March 1693, arrived at Batavia coming from the Netherlands 23 March 1693
Huijs te Spijk, fluytship, destined towards the West Coast of Sumatra 17 March 1693
Java, ship, arrived at Ceylon according to news received 10 March 1693
Lelij, pantjalang, arrived at Batavia coming via Cheribon from Japara 23 March 1693
Macassar, chialoup, departed Batavia via Cheribon and Japara towards Macassar 19 march 1693
Naardermeer, fluyt, 'uitgevaren' (=not longer suitable for service) and sold to the Chinese Libanco for 300 rijksdaalders 5 March 1693
Peperthuijn, small yacht, departed Batavia towards Bantam with a cargo of pepper 25 March 1693
Salland, also called Zalland, ship, destined towards Coromandel 27 march 1693
Schiebroek, small yacht, destined as homeward bound 14 March 1693, departed Batavia via Cape of Good Good Hope towards the Netherlands with a cargo valued ƒ 52013:14:08 15 March 1693
Silversteijn, destined towards Ceylon 17 March 1693
Snaauw, yacht, departed Batavia towards Macassar 16 March 1693
Susanna, yacht, destined towards via Ceylon towards Bengal 27 March 1693
Wijck op Zee, yacht, destined towards via Ceylon towards Bengal 27 March 1693
Wind, small frigate, arrived at Ceylon coming from the Netherlands 12 March 1693
Andromeda, small yacht, departed Batavia towards bantam 12 March 1693
Belois, fluyt, departed Batavia towards Palembang with a cargo valued ƒ 108235:19:08
Bije, arrived at Ceylon coming from the Netherlands 12 March 1693
Borsenburgh, fluyt, arrived at Ceylon according to news received 10 March 1693
Boswijk, destined towards Bengal 17 March 1693
Cauw, arrived at Ceylon coming from the Netherlands 12 March 1693
Courtgene, ship, departed Batavia towards Ambon 1 March 1693
Dieren, ship, arrived in the Strait according to a letter received 29 March 1693
Duijff, small fluyt, departed Batavia towards Timor 12 March 1693
Eemland, yacht, departed Batavia towards Banda 1 march 1693
Egelenburgh, fluyt, arrived at Batavia coming from Palembang with a cargo of 1805 picols pepper 10 March 1693
Gidion, fluyt, departed Batavia towards Japara for a cargo of timber 27 March 1693
Grijpvogel, small yacht, departed Batavia towards Ternate 4 March 1693
Grote Visserije, ship, arrived at Ceylon according to news received 10 March 1693
Herderin, small yacht, arrived at Malacca coming from Bengal according to a letter received 9 March 1693
Hobre, fluyt, mentioned as coming from Ceylon 10 March 1693, arrived at Batavia coming from Ceylon 12 March 1693
Hoff van Ilpendam, ship, arrived at Ceylon coming from the Netherlands and destined to be a homeward bound ship 12 March 1693
Huijs te Loo, ship, chamber Amsterdam, arrived in the Strait coming from the Netherlands according to a received letter 22 March 1693, arrived at Batavia coming from the Netherlands 23 March 1693
Huijs te Spijk, fluytship, destined towards the West Coast of Sumatra 17 March 1693
Java, ship, arrived at Ceylon according to news received 10 March 1693
Lelij, pantjalang, arrived at Batavia coming via Cheribon from Japara 23 March 1693
Macassar, chialoup, departed Batavia via Cheribon and Japara towards Macassar 19 march 1693
Naardermeer, fluyt, 'uitgevaren' (=not longer suitable for service) and sold to the Chinese Libanco for 300 rijksdaalders 5 March 1693
Peperthuijn, small yacht, departed Batavia towards Bantam with a cargo of pepper 25 March 1693
Salland, also called Zalland, ship, destined towards Coromandel 27 march 1693
Schiebroek, small yacht, destined as homeward bound 14 March 1693, departed Batavia via Cape of Good Good Hope towards the Netherlands with a cargo valued ƒ 52013:14:08 15 March 1693
Silversteijn, destined towards Ceylon 17 March 1693
Snaauw, yacht, departed Batavia towards Macassar 16 March 1693
Susanna, yacht, destined towards via Ceylon towards Bengal 27 March 1693
Wijck op Zee, yacht, destined towards via Ceylon towards Bengal 27 March 1693
Wind, small frigate, arrived at Ceylon coming from the Netherlands 12 March 1693
