The National Archive of Indonesia published on her website tables of contents of the so-called Daghregisters (Daily accounts) of the Castle Batavia, HR no. 2522. Unfortunately they are in Dutch. In those tables you can find for instance information about the ships arriving at and departing from Batavia (nowadays Djakarta). I extracted the movements of the ships and vessels owned by the E.I.C. The dates mentioned below in the text are the register dates.
See also on this weblog the notes dealing with cargo capacities and individual ships.
Berkenrode, fluyt, arrived at Batavia coming from the Netherlands with a cargo valued ƒ 126.687:09:00 4 May 1702, destined towards Japan 16 may 1702
Cakatoea, vesel, departed Batavia towards Tanjongpoura with 110 rijksdaalders as payment for 8 male horses and a cargo of padij 3 May 1702
Crab, pantsjalang, departed Batavia to replace the Hartloop in Sunda Strait 4 May 1702
Crab, fluyt, departed Batavia towards Tagal for a cargo of woodwork 1 May 1702
Diemen, fluyt, departed via Siam [Thailand] towards Japan via a cargo valued ƒ 201.020:12:00 1 May 1702
Ellemeet, ship, tiding of her passing Cochin 7 May 1702
Hartloop, frigate, still cruising in Sunda Strait 2 May 1702, destined towards Bengal 8 May 1702
Hengelaar, chialoup, departed Batavia with 2 pantsjalangs towards Cheribon to escort the wood raft lying over there 27 May 1702
Huijs te Loo, ship, destined towards Coromandel 8 May 1702
Lier, chialoup, arrived at Batavia coming from Cheribon while escorting 540 mud so-called laborers 10 May 1702
Macklesfiel, British ship, departed Batavia towards Banjar 13 May 1702
Meijdregt, ship, destined towards Bengal 8 May 1702, departed Batavia towards Bengal 25 May 1702
Nieuwenburg, fluyt, tiding of damage caused by a heavy storm and arrival at Cochin 7 May 1702
Nijptangh, hooker, tiding of her arrival at Ceylon [Sri Lanka] 7 May 1702
Overrijp, fluyt, tiding of her arrival in Sunda Strait coming from the Netherlands 18 May 1702, arrived at Batavia with a cargo valued ƒ 34.638:15:00 24 May 1702
Pampus, yacht, departed Batavia towards Bantam 1 May 1702
Princenland, fluyt, departed Batavia towards Cheribon for a cargo of woodwork 26 May 1702
Sirjansland, arrived at Batavia coming via Bima from Macasar with 4.500 picols sappan wood 16 May 1702
Schellach, frigate, arrived at Batavia with on board 705 parcels indigo valued ƒ 291.688:07:08 7 May 1702
Susanna, yacht, departed Batavia towards Malacca with a cargo valued ƒ 516.597:08:00 23 May 1702
Tangerang, pantsjalang, departed Batavia towards Tanjongpoura for a cargo of palisades 19 May 1702
Voorschoten, ship, destined towards Bengal 8 May 1702, departed Batavia towards Bengal 25 May 1702
Vosschenbosch, fluyt, arrived at Batavia coming from Sri Lanka with a cargo valued ƒ 50.979:08:00 31 May 1702
Zantloper, fluyt, tiding of her being wrecked while coming from Bengal 7 May 1702
