The National Archive of Indonesia published on her website tables of contents of the so-called Daghregisters (Daily accounts) of the Castle Batavia, HR no.'s 2512-2513. Unfortunately they are in Dutch. In those tables you can find for instance information about the ships arriving at and departing from Batavia (nowadays Djakarta). I extracted the movements of the ships and vessels owned by the E.I.C. The dates mentioned below in the text are the register dates. See also on this weblog the notes dealing with cargo capacities and individual ships.
Borsenburg, fluyt, fluyt, departed Batavia towards Bengal 30 June 1694
Bovencaspel, fluyt, arrived at Batavia coming from Japara 28 June 1694
Couverden, ship, arrived at Batavia coming from Japara 2 June 1694
Dieren, fluyt, departed Batavia towards Japan 29 June 1694
Eemlant, yacht, arrived at Batavia coming from Japara 29 June 1694
Elisabeth, chialoup, arrived at Batavia coming from Soerabaja 3 June 1694, destined towards Jambij 8 June 1694, departed Batavia
Fortuijn, small yacht, destined towards Jambij 8 June 1694
Gideon, fluyt, departed Batavia towards Malacca 15 June 1694
Goutvis, small yacht, arrived at Batavia coming from the West Coast of Sumatra 24 June 1694
Grote Visserije, called Visserije, ship, arrived at Batavia coming from Bantam with a cargo of 1238 bharen pepper 7 June 1694, destined towards Macassar 8 June 1694
Hobre, fluyt, arrived at Batavia coming from Bengal 28 June 1694
Jambij, yacht, news of the arrival at Macassar 2 June 1694
's Landswelvaren, chamber Zealand, news of her coming from the Netherlands was driven far towards the East off Timor 4 June 1694, arrived at Batavia 9 June 1694
Langewijck, fluyt, departed Batavia towards Japan 29 June 1694
Nierop, fluyt, departed Batavia via Ceylon towards Bengal 30 June 1694
Padang, chialoup, departed Batavia towards Malacca 15 June 1694
Schoondijke, fluyt, departed Batavia towards Bengal 30 June 1694
Sint Nicolaas, small yacht, arrived at Batavia coming via Japara from Soerabaja 10 June 1694, decided to laid up 22 June 1694
Sparwoude, fluyt, sold for 525 realen 15 June 1694
Spierdijk, fluyt, departed Batavia towards Japan 29 June 1694
Walenburg, fluyt, arrived at Batavia coming from Bengal 21 June 1694
Wint, frigate, departed Batavia towards Toncquin 29 June 1694