The National Archive of Indonesia published on her website tables of contents of the so-called Daghregisters (Daily accounts) of the Castle Batavia; HR no. 2495. Unfortunately they are in Dutch. In those tables you can find for instance information about the ships arriving at and departing from Batavia (nowadays Djakarta). I extracted the movements of the ships and vessels owned by the E.I.C. The dates mentioned below in the text are the register dates. See also on this weblog the notes dealing with cargo capacities and individual ships.
Bantam, small yacht, arrived at Batavia coming from Bantam 12 April 1683
Bataviase Coopman, small yacht, departed Batavia via Bima towards Timor 10 April 1683
Berckmeer, fluyt, arrived at Batavia coming from Samarang and Damack from Japara with 58 men from the wrecked Nieuw Noortwijck 27 April 1683
Croonvogel, hooker, departed Batavia towards Cheribon and Tagel 5 April 1683
Graeft, fluyt, departed Batavia via Soerabaja and Bima towards Banda 7 April 1683
Hoop, small yacht, arrived at Batavia coming from Bantam 23 April 1683
Huijs te Cleeff, small yacht, departed Batavia towards Tagal 2 April 1683, arrived at Batavia coming via Cheribon from Tagal 26 April 1683
Huijs te Merwede, ship, arrived at Batavia coming from the coast of Coromandel 24 April 1683
Huijs te Spijck, mentioned as being returned in Sunda Strait badly leaking 29 April 1683, arrived at Batavia 30 April 1683
Muijderbergh, yacht, arrived at Batavia coming from Bantam 12 April 1683
Nieuw Noortwijck, yacht, news of her being wrecked 2 April 1683
Opmeer, cat, departed Batavia towards Cheribon and Tagel 5 April 1683
Pijl, small yacht, arrived at Batavia coming from Bantam 23 April 1683
Roemerswael, yacht, arrived at Batavia coming from Bantam 1 April 1683
Smith, small yacht, departed Batavia to assist the Huijs te Spijck in Sunda Strait 29 April 1683, arrived at Batavia coming from Sunda Strait 30 April 1683
Snaauw, small yacht, arrived at Batavia coming from Bantam 12 April 1683, arrived at Batavia coming from Bantam 23 April 1683
Suijtbevelant, ship, departed Batavia via Soerabaja towards Bima 6 April 1683
Swanenburgh, fluyt, arrived at Batavia coming from Palembang 30 April 1683
Tijger, mentioned as cruising off Caraoangh, captain Jacob Vosch 21 April 1683, ditto 22 April 1683, ditto 27 April 1683
Vlieger, chialoup, departed Batavia towards Tanjongpoura 1 April 1683, arrived at Batavia coming from the river Craoang 3 April 1683
Vrije Zee, ship, departed Batavia to assist the Huijs te Spijck in Sunda Strait 29 April 1683, arrived at Batavia coming from Sunda Strait 30 April 1683